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Cluster: SW130_59_sub_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_50774 k141_50774_8 5521 7602 + 9.A.8.1.6
STP k141_50774 k141_50774_9 7750 7968 + HMA
TC k141_50774 k141_50774_10 8004 9914 + 3.A.3.6.10
pfam k141_50774 k141_50774_11 10057 10983 + Semialdhyde_dh | Semialdhyde_dhC_1
TC k141_50774 k141_50774_12 11117 12361 + 2.A.42.1.6
TC k141_50774 k141_50774_13 12579 13553 - 2.A.28.2.4
pfam k141_50774 k141_50774_14 13558 14409 - Pantoate_ligase
TC k141_50774 k141_50774_15 14970 15698 + 3.A.1.3.16
TC k141_50774 k141_50774_16 15753 16631 + 3.A.1.3.16
TC k141_50774 k141_50774_17 16728 17423 + 3.A.1.3.16
TC k141_50774 k141_50774_18 17437 18228 + 3.A.1.3.22
TC k141_50774 k141_50774_19 18356 19792 + 2.A.21.3.21
CAZyme k141_50774 k141_50774_20 19856 21019 + GH73
pfam k141_50774 k141_50774_21 21016 21486 + SpoU_methylase
pfam k141_50774 k141_50774_22 21483 21845 + PTPS
TC k141_50774 k141_50774_23 21839 22606 + 9.B.10.1.1
Gene ID: k141_50774_8
Type: TC
Location: 5521 - 7602 (+)
Gene ID: k141_50774_9
Type: STP
Location: 7750 - 7968 (+)
Gene ID: k141_50774_10
Type: TC
Location: 8004 - 9914 (+)
Gene ID: k141_50774_11
Type: pfam
Location: 10057 - 10983 (+)
Gene ID: k141_50774_12
Type: TC
Location: 11117 - 12361 (+)
Gene ID: k141_50774_13
Type: TC
Location: 12579 - 13553 (-)
Gene ID: k141_50774_14
Type: pfam
Location: 13558 - 14409 (-)
Gene ID: k141_50774_15
Type: TC
Location: 14970 - 15698 (+)
Gene ID: k141_50774_16
Type: TC
Location: 15753 - 16631 (+)
Gene ID: k141_50774_17
Type: TC
Location: 16728 - 17423 (+)
Gene ID: k141_50774_18
Type: TC
Location: 17437 - 18228 (+)
Gene ID: k141_50774_19
Type: TC
Location: 18356 - 19792 (+)
Gene ID: k141_50774_20
Type: CAZyme
Location: 19856 - 21019 (+)
Gene ID: k141_50774_21
Type: pfam
Location: 21016 - 21486 (+)
Gene ID: k141_50774_22
Type: pfam
Location: 21483 - 21845 (+)
Gene ID: k141_50774_23
Type: TC
Location: 21839 - 22606 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_50774_13 vegan > omnivore 3.51695 0.04449
k141_50774_13 vegetarian > omnivore 5.21388 0.03132
k141_50774_15 vegan > omnivore 1.41796 0.04449

🧭 Explore Read Mapping of CGC

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