Cluster: SW130_59_sub_CGC1
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 2
- Substrate:
- Genome ID: SW130_59_sub
- CGC Family ID: CGCFAM_05935
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_20795 | k141_20795_40 | 49540 | 50931 | - | 2.A.118.1.4 |
| TF | k141_20795 | k141_20795_41 | 51145 | 52116 | - | HTH_1 |
| peptidase | k141_20795 | k141_20795_42 | 52290 | 53309 | + | C45.UPW |
| TC | k141_20795 | k141_20795_43 | 53366 | 54742 | + | 2.A.118.1.5 |
| TC | k141_20795 | k141_20795_44 | 54779 | 56191 | + | 2.A.118.1.3 |
| peptidase | k141_20795 | k141_20795_45 | 56221 | 57561 | + | M20.UPF |
| NULL(UNKNOWN) | k141_20795 | k141_20795_46 | 57921 | 58913 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_20795 | k141_20795_47 | 59346 | 60782 | - | 2.A.35.1.1 |
| pfam | k141_20795 | k141_20795_48 | 60784 | 61338 | - | ATC_hydrolase |
| NULL(UNKNOWN) | k141_20795 | k141_20795_49 | 61543 | 61665 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_20795 | k141_20795_50 | 61803 | 64562 | - | 3.A.3.4.1 |
| CAZyme | k141_20795 | k141_20795_51 | 65084 | 66370 | - | GT2 |
| pfam | k141_20795 | k141_20795_52 | 66393 | 67082 | - | CDP-OH_P_transf |
| pfam | k141_20795 | k141_20795_53 | 67079 | 67726 | - | PS_Dcarbxylase |
| CAZyme | k141_20795 | k141_20795_54 | 67856 | 68599 | - | GT26 |
Gene ID: k141_20795_40
Type: TC
Location: 49540 - 50931 (-)
Type: TC
Location: 49540 - 50931 (-)
Gene ID: k141_20795_41
Type: TF
Location: 51145 - 52116 (-)
Type: TF
Location: 51145 - 52116 (-)
Gene ID: k141_20795_42
Type: peptidase
Location: 52290 - 53309 (+)
Type: peptidase
Location: 52290 - 53309 (+)
Gene ID: k141_20795_43
Type: TC
Location: 53366 - 54742 (+)
Type: TC
Location: 53366 - 54742 (+)
Gene ID: k141_20795_44
Type: TC
Location: 54779 - 56191 (+)
Type: TC
Location: 54779 - 56191 (+)
Gene ID: k141_20795_45
Type: peptidase
Location: 56221 - 57561 (+)
Type: peptidase
Location: 56221 - 57561 (+)
Gene ID: k141_20795_46
Type:
Location: 57921 - 58913 (-)
Type:
Location: 57921 - 58913 (-)
Gene ID: k141_20795_47
Type: TC
Location: 59346 - 60782 (-)
Type: TC
Location: 59346 - 60782 (-)
Gene ID: k141_20795_48
Type: pfam
Location: 60784 - 61338 (-)
Type: pfam
Location: 60784 - 61338 (-)
Gene ID: k141_20795_49
Type:
Location: 61543 - 61665 (-)
Type:
Location: 61543 - 61665 (-)
Gene ID: k141_20795_50
Type: TC
Location: 61803 - 64562 (-)
Type: TC
Location: 61803 - 64562 (-)
Gene ID: k141_20795_51
Type: CAZyme
Location: 65084 - 66370 (-)
Type: CAZyme
Location: 65084 - 66370 (-)
Gene ID: k141_20795_52
Type: pfam
Location: 66393 - 67082 (-)
Type: pfam
Location: 66393 - 67082 (-)
Gene ID: k141_20795_53
Type: pfam
Location: 67079 - 67726 (-)
Type: pfam
Location: 67079 - 67726 (-)
Gene ID: k141_20795_54
Type: CAZyme
Location: 67856 - 68599 (-)
Type: CAZyme
Location: 67856 - 68599 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus fermentans_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.