Genome Details
Selected Rep_genome_ID: SW045_bin.65
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
RF16
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0268 | 2,204,057 | 94.35% | 1.344% | Ethiopia | Africa | HRGM |
| SW045_bin.65 | 2,476,327 | 97.04% | 1.08% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| SW045_bin.65_CGC7 | CGCFAM_00001 | Yes | 4 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| SW045_bin.65_CGC12 | CGCFAM_00213 | Yes | 7 | 3 | beta-glucan |
| SW045_bin.65_CGC6 | CGCFAM_00882 | Yes | 3 | 1 | |
| SW045_bin.65_CGC20 | CGCFAM_01224 | Yes | 8 | 1 | |
| SW045_bin.65_CGC16 | CGCFAM_01701 | Yes | 7 | 1 | |
| SW045_bin.65_CGC9 | CGCFAM_01779 | Yes | 9 | 3 | |
| SW045_bin.65_CGC1 | CGCFAM_02691 | Yes | 5 | 1 | |
| SW045_bin.65_CGC4 | CGCFAM_05476 | Yes | 8 | 4 | |
| SW045_bin.65_CGC17 | CGCFAM_09370 | Yes | 4 | 1 |
Top CAZyme Families