dbCAN Logo

Cluster: SW045_bin.65_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_13023 k141_13023_45 65511 66254 + 1.B.42.1.2
pfam k141_13023 k141_13023_46 66473 67414 + Kelch_1 | Kelch_1 | Kelch_2 | Kelch_3 | Kelch_3 | Kelch_4 | Kelch_4 | Kelch_6 | Kelch_6 | Kelch_KLHDC2_KLHL20_DRC7
TC k141_13023 k141_13023_47 67428 68879 + 1.B.73.2.2
pfam k141_13023 k141_13023_48 68866 69750 - Glycos_transf_2 | Glyco_tranf_2_3
CAZyme k141_13023 k141_13023_49 69751 70494 - GT2
CAZyme k141_13023 k141_13023_50 70499 71554 - GT4
CAZyme k141_13023 k141_13023_51 71535 72713 - GT4
NULL(UNKNOWN) k141_13023 k141_13023_52 72710 74101 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_13023 k141_13023_53 74092 75420 - 2.A.66.2.1
Gene ID: k141_13023_45
Type: TC
Location: 65511 - 66254 (+)
Gene ID: k141_13023_46
Type: pfam
Location: 66473 - 67414 (+)
Gene ID: k141_13023_47
Type: TC
Location: 67428 - 68879 (+)
Gene ID: k141_13023_48
Type: pfam
Location: 68866 - 69750 (-)
Gene ID: k141_13023_49
Type: CAZyme
Location: 69751 - 70494 (-)
Gene ID: k141_13023_50
Type: CAZyme
Location: 70499 - 71554 (-)
Gene ID: k141_13023_51
Type: CAZyme
Location: 71535 - 72713 (-)
Gene ID: k141_13023_52
Type:
Location: 72710 - 74101 (-)
Gene ID: k141_13023_53
Type: TC
Location: 74092 - 75420 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Paludibacteraceae
→
Genus
RF16
→
Species
RF16 sp934692905

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List