Cluster: SW045_bin.65_CGC4
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: SW045_bin.65
- CGC Family ID: CGCFAM_05476
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_125616 | k141_125616_29 | 29538 | 30632 | + | GT4 |
| CAZyme | k141_125616 | k141_125616_30 | 30629 | 31669 | + | GT4 |
| pfam | k141_125616 | k141_125616_31 | 31680 | 32960 | + | Wzy_C |
| CAZyme | k141_125616 | k141_125616_32 | 32875 | 33747 | - | GT2 |
| pfam | k141_125616 | k141_125616_33 | 33744 | 34457 | - | Kdo |
| CAZyme | k141_125616 | k141_125616_34 | 34448 | 35389 | - | GT9 |
| pfam | k141_125616 | k141_125616_35 | 35442 | 36047 | - | DUF4254 |
| TC | k141_125616 | k141_125616_36 | 36073 | 37521 | - | 2.A.21.5.1 |
Gene ID: k141_125616_29
Type: CAZyme
Location: 29538 - 30632 (+)
Type: CAZyme
Location: 29538 - 30632 (+)
Gene ID: k141_125616_30
Type: CAZyme
Location: 30629 - 31669 (+)
Type: CAZyme
Location: 30629 - 31669 (+)
Gene ID: k141_125616_31
Type: pfam
Location: 31680 - 32960 (+)
Type: pfam
Location: 31680 - 32960 (+)
Gene ID: k141_125616_32
Type: CAZyme
Location: 32875 - 33747 (-)
Type: CAZyme
Location: 32875 - 33747 (-)
Gene ID: k141_125616_33
Type: pfam
Location: 33744 - 34457 (-)
Type: pfam
Location: 33744 - 34457 (-)
Gene ID: k141_125616_34
Type: CAZyme
Location: 34448 - 35389 (-)
Type: CAZyme
Location: 34448 - 35389 (-)
Gene ID: k141_125616_35
Type: pfam
Location: 35442 - 36047 (-)
Type: pfam
Location: 35442 - 36047 (-)
Gene ID: k141_125616_36
Type: TC
Location: 36073 - 37521 (-)
Type: TC
Location: 36073 - 37521 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
RF16
Species
RF16 sp934692905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.