Genome Details
Selected Rep_genome_ID: Rep_618
Total Genomes Found: 9
Total Genomes Found: 9
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes finegoldii
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| B59.bin_6 | 3,351,010 | 100% | 0.48% | China(Inner Mongolia) | Asia | IMGG |
| CGMR033155 | 3,095,025 | 100% | 0% | China | Asia | CGMR |
| HRGMv2_0202 | 3,356,390 | 100% | 0% | South Korea | Asia | HRGM |
| Rep_618 | 3,646,413 | 100% | 0% | NA | NA | WIS |
| SPMP05_bin.24 | 3,159,272 | 97.01% | 0% | Singapore | Asia | SPMP |
| SPMP06_bin.16 | 2,961,293 | 97.6% | 0% | Singapore | Asia | SPMP |
| SPMP40_bin.14 | 2,936,979 | 91.91% | 0.16% | Singapore | Asia | SPMP |
| SPMP48_bin.107 | 3,123,387 | 98.61% | 0% | Singapore | Asia | SPMP |
| SW089_5 | 3,684,829 | 100% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_618_CGC24 | CGCFAM_05735 | Yes | 4 | 1 | |
| Rep_618_CGC7 | CGCFAM_05956 | Yes | 16 | 5 | |
| Rep_618_CGC10 | CGCFAM_10334 | Yes | 5 | 3 |
Top CAZyme Families