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Cluster: Rep_618_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_618_c_0 Rep_618_c_0_634 763008 764504 + 2.A.36.6.5
NULL(UNKNOWN) Rep_618_c_0 Rep_618_c_0_635 765079 765540 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_618_c_0 Rep_618_c_0_636 765751 767997 - GH20
CAZyme Rep_618_c_0 Rep_618_c_0_637 768002 770317 - GH3
CAZyme Rep_618_c_0 Rep_618_c_0_638 770314 772632 - GH92
Gene ID: Rep_618_c_0_634
Type: TC
Location: 763008 - 764504 (+)
Gene ID: Rep_618_c_0_635
Type:
Location: 765079 - 765540 (+)
Gene ID: Rep_618_c_0_636
Type: CAZyme
Location: 765751 - 767997 (-)
Gene ID: Rep_618_c_0_637
Type: CAZyme
Location: 768002 - 770317 (-)
Gene ID: Rep_618_c_0_638
Type: CAZyme
Location: 770314 - 772632 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_618_c_0_635 vegan > omnivore 1.63619 0.00139
Rep_618_c_0_635 vegetarian > omnivore 1.09541 0.00229
Rep_618_c_0_636 vegan > omnivore 2.12989 0.00139
Rep_618_c_0_636 vegetarian > omnivore 1.49170 0.00229
Rep_618_c_0_637 vegan > omnivore 1.75139 0.00139
Rep_618_c_0_637 vegetarian > omnivore 1.45141 0.00229
Rep_618_c_0_638 vegan > omnivore 1.61550 0.00139
Rep_618_c_0_638 vegetarian > omnivore 1.28762 0.00229

🧭 Explore Read Mapping of CGC

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