Genome Details
Selected Rep_genome_ID: Rep_287
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp002491165
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR052581 | 2,522,804 | 95.45% | 0.38% | China | Asia | CGMR |
| Rep_287 | 2,629,642 | 97.7137% | 0.377358% | NA | NA | WIS |
| SW089_11 | 2,908,318 | 93.5% | 0.77% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_287_CGC15 | CGCFAM_00071 | Yes | 9 | 5 | |
| Rep_287_CGC7 | CGCFAM_00227 | Yes | 4 | 1 | |
| Rep_287_CGC18 | CGCFAM_00356 | Yes | 7 | 1 | |
| Rep_287_CGC16 | CGCFAM_01393 | Yes | 4 | 1 | |
| Rep_287_CGC10 | CGCFAM_01460 | Yes | 3 | 1 | |
| Rep_287_CGC12 | CGCFAM_02299 | Yes | 6 | 2 | beta-glucan |
| Rep_287_CGC13 | CGCFAM_06714 | Yes | 4 | 1 |
Top CAZyme Families