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Cluster: Rep_287_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_287_c_31 Rep_287_c_31_1 3 440 - 2.A.123.4.1
CAZyme Rep_287_c_31 Rep_287_c_31_2 437 1168 - GT2
CAZyme Rep_287_c_31 Rep_287_c_31_3 1165 2814 - GT83
STP Rep_287_c_31 Rep_287_c_31_4 3011 4717 - Pkinase
TC Rep_287_c_31 Rep_287_c_31_5 5106 7553 + 9.A.8.1.6
CAZyme Rep_287_c_31 Rep_287_c_31_6 7560 8357 + GT2
pfam Rep_287_c_31 Rep_287_c_31_7 8449 10782 - DUF6562
CAZyme Rep_287_c_31 Rep_287_c_31_8 11159 12217 + GT4
CAZyme Rep_287_c_31 Rep_287_c_31_9 12185 13246 - GT9
Gene ID: Rep_287_c_31_1
Type: TC
Location: 3 - 440 (-)
Gene ID: Rep_287_c_31_2
Type: CAZyme
Location: 437 - 1168 (-)
Gene ID: Rep_287_c_31_3
Type: CAZyme
Location: 1165 - 2814 (-)
Gene ID: Rep_287_c_31_4
Type: STP
Location: 3011 - 4717 (-)
Gene ID: Rep_287_c_31_5
Type: TC
Location: 5106 - 7553 (+)
Gene ID: Rep_287_c_31_6
Type: CAZyme
Location: 7560 - 8357 (+)
Gene ID: Rep_287_c_31_7
Type: pfam
Location: 8449 - 10782 (-)
Gene ID: Rep_287_c_31_8
Type: CAZyme
Location: 11159 - 12217 (+)
Gene ID: Rep_287_c_31_9
Type: CAZyme
Location: 12185 - 13246 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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