Cluster: Rep_287_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_287
- CGC Family ID: CGCFAM_00356
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_287_c_39 | Rep_287_c_39_10 | 8038 | 9210 | - | 3.B.1.1.3 |
| TC | Rep_287_c_39 | Rep_287_c_39_11 | 9224 | 9670 | - | 3.B.1.1.2 |
| pfam | Rep_287_c_39 | Rep_287_c_39_12 | 9811 | 10431 | - | OAD_gamma |
| TC | Rep_287_c_39 | Rep_287_c_39_13 | 10555 | 12108 | - | 3.B.1.1.2 |
| STP | Rep_287_c_39 | Rep_287_c_39_14 | 12250 | 12672 | - | Glyoxalase |
| pfam | Rep_287_c_39 | Rep_287_c_39_15 | 13072 | 14064 | + | Hexapep | Hexapep | LpxD | Hexapep_2 |
| CAZyme | Rep_287_c_39 | Rep_287_c_39_16 | 14118 | 15500 | + | CE11 |
Gene ID: Rep_287_c_39_10
Type: TC
Location: 8038 - 9210 (-)
Type: TC
Location: 8038 - 9210 (-)
Gene ID: Rep_287_c_39_11
Type: TC
Location: 9224 - 9670 (-)
Type: TC
Location: 9224 - 9670 (-)
Gene ID: Rep_287_c_39_12
Type: pfam
Location: 9811 - 10431 (-)
Type: pfam
Location: 9811 - 10431 (-)
Gene ID: Rep_287_c_39_13
Type: TC
Location: 10555 - 12108 (-)
Type: TC
Location: 10555 - 12108 (-)
Gene ID: Rep_287_c_39_14
Type: STP
Location: 12250 - 12672 (-)
Type: STP
Location: 12250 - 12672 (-)
Gene ID: Rep_287_c_39_15
Type: pfam
Location: 13072 - 14064 (+)
Type: pfam
Location: 13072 - 14064 (+)
Gene ID: Rep_287_c_39_16
Type: CAZyme
Location: 14118 - 15500 (+)
Type: CAZyme
Location: 14118 - 15500 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp002491165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.