Genome Details
Selected Rep_genome_ID: Rep_198
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella salivae
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| Rep_198 | 2,805,952 | 90.5709% | 1.68919% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_198_CGC17 | CGCFAM_00001 | Yes | 4 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_198_CGC21 | CGCFAM_00001 | Yes | 4 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_198_CGC10 | CGCFAM_00016 | Yes | 8 | 1 | host glycan |
| Rep_198_CGC5 | CGCFAM_00016 | Yes | 5 | 2 | host glycan |
| Rep_198_CGC19 | CGCFAM_00023 | Yes | 4 | 2 | |
| Rep_198_CGC36 | CGCFAM_00028 | Yes | 5 | 3 | |
| Rep_198_CGC37 | CGCFAM_00040 | Yes | 6 | 3 | |
| Rep_198_CGC32 | CGCFAM_00072 | Yes | 3 | 1 | |
| Rep_198_CGC22 | CGCFAM_00095 | Yes | 6 | 3 | |
| Rep_198_CGC14 | CGCFAM_00148 | Yes | 6 | 4 | |
| Rep_198_CGC6 | CGCFAM_00579 | Yes | 11 | 3 | |
| Rep_198_CGC35 | CGCFAM_00630 | Yes | 3 | 1 | |
| Rep_198_CGC12 | CGCFAM_01216 | Yes | 5 | 2 | |
| Rep_198_CGC3 | CGCFAM_06470 | Yes | 11 | 3 | |
| Rep_198_CGC16 | CGCFAM_09089 | Yes | 6 | 1 | |
| Rep_198_CGC28 | CGCFAM_09091 | Yes | 4 | 2 | |
| Rep_198_CGC31 | CGCFAM_09092 | Yes | 4 | 1 | |
| Rep_198_CGC8 | CGCFAM_09204 | Yes | 4 | 1 |
Top CAZyme Families