Cluster: Rep_198_CGC10
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: Rep_198
- CGC Family ID: CGCFAM_00016
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_198_c_14 | Rep_198_c_14_5 | 3541 | 4905 | - | GH18 |
| pfam | Rep_198_c_14 | Rep_198_c_14_6 | 4924 | 6072 | - | BT_3987-like_N | Laminin_G_3 |
| pfam | Rep_198_c_14 | Rep_198_c_14_7 | 6075 | 7118 | - | GH18_BT1044-like |
| TC | Rep_198_c_14 | Rep_198_c_14_8 | 7161 | 8735 | - | 8.A.46.2.2 |
| TC | Rep_198_c_14 | Rep_198_c_14_9 | 8747 | 12067 | - | 1.B.14.6.13 |
| STP | Rep_198_c_14 | Rep_198_c_14_10 | 12179 | 13183 | - | FecR |
| TF | Rep_198_c_14 | Rep_198_c_14_11 | 13277 | 13852 | - | GerE |
| TC | Rep_198_c_14 | Rep_198_c_14_12 | 14096 | 14797 | + | 3.A.1.124.2 |
Gene ID: Rep_198_c_14_5
Type: CAZyme
Location: 3541 - 4905 (-)
Type: CAZyme
Location: 3541 - 4905 (-)
Gene ID: Rep_198_c_14_6
Type: pfam
Location: 4924 - 6072 (-)
Type: pfam
Location: 4924 - 6072 (-)
Gene ID: Rep_198_c_14_7
Type: pfam
Location: 6075 - 7118 (-)
Type: pfam
Location: 6075 - 7118 (-)
Gene ID: Rep_198_c_14_8
Type: TC
Location: 7161 - 8735 (-)
Type: TC
Location: 7161 - 8735 (-)
Gene ID: Rep_198_c_14_9
Type: TC
Location: 8747 - 12067 (-)
Type: TC
Location: 8747 - 12067 (-)
Gene ID: Rep_198_c_14_10
Type: STP
Location: 12179 - 13183 (-)
Type: STP
Location: 12179 - 13183 (-)
Gene ID: Rep_198_c_14_11
Type: TF
Location: 13277 - 13852 (-)
Type: TF
Location: 13277 - 13852 (-)
Gene ID: Rep_198_c_14_12
Type: TC
Location: 14096 - 14797 (+)
Type: TC
Location: 14096 - 14797 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella salivae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.