Genome Details
Selected Rep_genome_ID: Rep_159
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900314365
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR080711 | 3,855,500 | 94.29% | 0.36% | China | Asia | CGMR |
| Rep_159 | 3,371,547 | 96.4502% | 0.62468% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_159_CGC18 | CGCFAM_00001 | Yes | 4 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_159_CGC6 | CGCFAM_00049 | Yes | 9 | 2 | |
| Rep_159_CGC27 | CGCFAM_00109 | Yes | 7 | 3 | host glycan |
| Rep_159_CGC20 | CGCFAM_00152 | Yes | 5 | 1 | |
| Rep_159_CGC11 | CGCFAM_00192 | Yes | 6 | 1 | |
| Rep_159_CGC24 | CGCFAM_00349 | Yes | 5 | 1 | |
| Rep_159_CGC32 | CGCFAM_00358 | Yes | 4 | 1 | |
| Rep_159_CGC13 | CGCFAM_00468 | Yes | 5 | 2 | |
| Rep_159_CGC31 | CGCFAM_00603 | Yes | 7 | 2 | |
| Rep_159_CGC9 | CGCFAM_00648 | Yes | 6 | 3 | |
| Rep_159_CGC26 | CGCFAM_01828 | Yes | 3 | 1 | |
| Rep_159_CGC5 | CGCFAM_02030 | Yes | 8 | 3 | |
| Rep_159_CGC10 | CGCFAM_07156 | Yes | 5 | 3 | |
| Rep_159_CGC19 | CGCFAM_09499 | Yes | 3 | 1 |
Top CAZyme Families