Genome Details
Selected Rep_genome_ID: MGYG000004424
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900548365
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| MGYG000004424 | 2,127,341 | 97.58% | 0% | Israel | Asia | UHGG |
| SW124_16_sub | 2,087,904 | 91.94% | 0.54% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| MGYG000004424_CGC12 | CGCFAM_00012 | Yes | 4 | 1 | host glycan/beta-glucan |
| MGYG000004424_CGC9 | CGCFAM_00013 | Yes | 4 | 1 | |
| MGYG000004424_CGC14 | CGCFAM_00131 | Yes | 4 | 1 | |
| MGYG000004424_CGC1 | CGCFAM_00289 | Yes | 6 | 3 | |
| MGYG000004424_CGC8 | CGCFAM_00309 | Yes | 7 | 2 | |
| MGYG000004424_CGC4 | CGCFAM_03827 | Yes | 11 | 1 | |
| MGYG000004424_CGC15 | CGCFAM_08640 | Yes | 3 | 1 | |
| MGYG000004424_CGC11 | CGCFAM_10807 | Yes | 6 | 3 |
Top CAZyme Families