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Cluster: MGYG000004424_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004424_7 MGYG000004424_7_13 19611 20309 + 4.A.1.2.13
TC MGYG000004424_7 MGYG000004424_7_14 20316 21575 + 4.A.1.2.13
CAZyme MGYG000004424_7 MGYG000004424_7_15 21618 23351 + GH13_29
pfam MGYG000004424_7 MGYG000004424_7_16 23888 24196 + Thiamine_BP
TC MGYG000004424_7 MGYG000004424_7_17 24198 25064 + 3.A.1.17.13
TC MGYG000004424_7 MGYG000004424_7_18 25073 26143 + 3.A.1.17.8
TC MGYG000004424_7 MGYG000004424_7_19 26279 27034 + 3.A.1.17.13
STP MGYG000004424_7 MGYG000004424_7_20 27383 29320 + Pyr_redox_2
STP MGYG000004424_7 MGYG000004424_7_21 29710 29931 + FeoA
TC MGYG000004424_7 MGYG000004424_7_22 29987 30208 + 9.A.8.1.6
TC MGYG000004424_7 MGYG000004424_7_23 30400 32631 + 9.A.8.1.6
Gene ID: MGYG000004424_7_13
Type: TC
Location: 19611 - 20309 (+)
Gene ID: MGYG000004424_7_14
Type: TC
Location: 20316 - 21575 (+)
Gene ID: MGYG000004424_7_15
Type: CAZyme
Location: 21618 - 23351 (+)
Gene ID: MGYG000004424_7_16
Type: pfam
Location: 23888 - 24196 (+)
Gene ID: MGYG000004424_7_17
Type: TC
Location: 24198 - 25064 (+)
Gene ID: MGYG000004424_7_18
Type: TC
Location: 25073 - 26143 (+)
Gene ID: MGYG000004424_7_19
Type: TC
Location: 26279 - 27034 (+)
Gene ID: MGYG000004424_7_20
Type: STP
Location: 27383 - 29320 (+)
Gene ID: MGYG000004424_7_21
Type: STP
Location: 29710 - 29931 (+)
Gene ID: MGYG000004424_7_22
Type: TC
Location: 29987 - 30208 (+)
Gene ID: MGYG000004424_7_23
Type: TC
Location: 30400 - 32631 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004424_7_22 vegetarian > omnivore 1.57560 0.04449

🧭 Explore Read Mapping of CGC

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