Genome Details
Selected Rep_genome_ID: MGYG000003419
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
RF16
Species
RF16 sp900766775
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| MGYG000003419 | 2,335,712 | 91.94% | 1.61% | Fiji | Oceania | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| MGYG000003419_CGC10 | CGCFAM_00002 | Yes | 5 | 3 | |
| MGYG000003419_CGC18 | CGCFAM_00017 | Yes | 7 | 1 | fructan |
| MGYG000003419_CGC3 | CGCFAM_00068 | Yes | 5 | 2 | |
| MGYG000003419_CGC20 | CGCFAM_00095 | Yes | 6 | 3 | |
| MGYG000003419_CGC12 | CGCFAM_00129 | Yes | 4 | 3 | beta-mannan |
| MGYG000003419_CGC16 | CGCFAM_00184 | Yes | 7 | 3 | |
| MGYG000003419_CGC28 | CGCFAM_00423 | Yes | 4 | 1 | |
| MGYG000003419_CGC23 | CGCFAM_01078 | Yes | 8 | 6 | |
| MGYG000003419_CGC6 | CGCFAM_01418 | Yes | 5 | 2 | |
| MGYG000003419_CGC22 | CGCFAM_02027 | Yes | 7 | 2 | |
| MGYG000003419_CGC11 | CGCFAM_02142 | Yes | 6 | 2 | |
| MGYG000003419_CGC1 | CGCFAM_02232 | Yes | 3 | 1 | |
| MGYG000003419_CGC9 | CGCFAM_02691 | Yes | 5 | 2 | |
| MGYG000003419_CGC8 | CGCFAM_02829 | Yes | 4 | 1 | |
| MGYG000003419_CGC19 | CGCFAM_03587 | Yes | 4 | 2 | |
| MGYG000003419_CGC14 | CGCFAM_05285 | Yes | 10 | 5 | |
| MGYG000003419_CGC7 | CGCFAM_05903 | Yes | 11 | 5 | |
| MGYG000003419_CGC27 | CGCFAM_08811 | Yes | 5 | 1 |
Top CAZyme Families