Genome Details
Selected Rep_genome_ID: HRGMv2_4356
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Aerococcaceae
Genus
Abiotrophia
Species
Abiotrophia defectiva
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4356 | 1,818,578 | 91.89% | 1.086% | Italy | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4356_CGC2 | CGCFAM_00089 | Yes | 4 | 1 | |
| HRGMv2_4356_CGC14 | CGCFAM_00203 | Yes | 7 | 1 | |
| HRGMv2_4356_CGC5 | CGCFAM_00677 | Yes | 3 | 1 | |
| HRGMv2_4356_CGC17 | CGCFAM_00725 | Yes | 4 | 2 | alpha-glucan |
| HRGMv2_4356_CGC8 | CGCFAM_01080 | Yes | 8 | 1 | fructan |
| HRGMv2_4356_CGC6 | CGCFAM_01154 | Yes | 4 | 1 | |
| HRGMv2_4356_CGC22 | CGCFAM_02434 | Yes | 4 | 1 | |
| HRGMv2_4356_CGC1 | CGCFAM_02721 | Yes | 4 | 1 | |
| HRGMv2_4356_CGC13 | CGCFAM_03546 | Yes | 4 | 1 | |
| HRGMv2_4356_CGC7 | CGCFAM_08597 | Yes | 7 | 2 | |
| HRGMv2_4356_CGC20 | CGCFAM_09063 | Yes | 6 | 2 | |
| HRGMv2_4356_CGC21 | CGCFAM_09180 | Yes | 4 | 1 | |
| HRGMv2_4356_CGC11 | CGCFAM_09492 | Yes | 3 | 1 |
Top CAZyme Families