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Cluster: HRGMv2_4356_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4356_15 HRGMv2_4356_15_9 9309 9626 + 4.A.3.2.4
TC HRGMv2_4356_15 HRGMv2_4356_15_10 9639 9956 + 4.A.3.2.2
TC HRGMv2_4356_15 HRGMv2_4356_15_11 10044 11408 + 4.A.3.2.4
CAZyme HRGMv2_4356_15 HRGMv2_4356_15_12 11405 13207 + GH35
TC HRGMv2_4356_15 HRGMv2_4356_15_13 13204 14133 + 8.A.5.1.7
CAZyme HRGMv2_4356_15 HRGMv2_4356_15_14 14290 15468 + GT1
TC HRGMv2_4356_15 HRGMv2_4356_15_15 15643 16725 + 3.A.1.11.7
Gene ID: HRGMv2_4356_15_9
Type: TC
Location: 9309 - 9626 (+)
Gene ID: HRGMv2_4356_15_10
Type: TC
Location: 9639 - 9956 (+)
Gene ID: HRGMv2_4356_15_11
Type: TC
Location: 10044 - 11408 (+)
Gene ID: HRGMv2_4356_15_12
Type: CAZyme
Location: 11405 - 13207 (+)
Gene ID: HRGMv2_4356_15_13
Type: TC
Location: 13204 - 14133 (+)
Gene ID: HRGMv2_4356_15_14
Type: CAZyme
Location: 14290 - 15468 (+)
Gene ID: HRGMv2_4356_15_15
Type: TC
Location: 15643 - 16725 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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