Genome Details
Selected Rep_genome_ID: HRGMv2_3814
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Scardovia
Species
Scardovia denticolens
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3814 | 1,729,135 | 95.72% | 0.798% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3814_CGC19 | CGCFAM_00021 | Yes | 5 | 1 | |
| HRGMv2_3814_CGC17 | CGCFAM_00103 | Yes | 3 | 1 | |
| HRGMv2_3814_CGC13 | CGCFAM_00687 | Yes | 3 | 1 | |
| HRGMv2_3814_CGC14 | CGCFAM_00817 | Yes | 5 | 1 | |
| HRGMv2_3814_CGC11 | CGCFAM_00991 | Yes | 5 | 1 | |
| HRGMv2_3814_CGC1 | CGCFAM_02069 | Yes | 4 | 1 | |
| HRGMv2_3814_CGC3 | CGCFAM_02434 | Yes | 5 | 1 | |
| HRGMv2_3814_CGC22 | CGCFAM_02768 | Yes | 3 | 1 | |
| HRGMv2_3814_CGC5 | CGCFAM_03416 | Yes | 4 | 1 | |
| HRGMv2_3814_CGC23 | CGCFAM_03705 | Yes | 3 | 1 |
Top CAZyme Families