Genome Details
Selected Rep_genome_ID: HRGMv2_3504
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Dethiosulfovibrionaceae
Genus
Pyramidobacter
Species
Pyramidobacter piscolens
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR013375 | 2,267,741 | 100% | 0% | China | Asia | CGMR |
| HRGMv2_3504 | 2,454,530 | 100% | 0% | South Korea | Asia | HRGM |
| MGYG000001589 | 2,462,654 | 100% | 0% | China | Asia | UHGG |
| Rep_2705 | 2,267,873 | 100% | 0% | NA | NA | WIS |
| SW004_3 | 2,571,175 | 100% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3504_CGC7 | CGCFAM_00003 | Yes | 4 | 1 | |
| HRGMv2_3504_CGC9 | CGCFAM_00135 | Yes | 4 | 1 | |
| HRGMv2_3504_CGC4 | CGCFAM_00744 | Yes | 5 | 2 | |
| HRGMv2_3504_CGC10 | CGCFAM_03899 | Yes | 27 | 2 | |
| HRGMv2_3504_CGC8 | CGCFAM_04414 | Yes | 5 | 1 | |
| HRGMv2_3504_CGC1 | CGCFAM_08965 | Yes | 5 | 1 | |
| HRGMv2_3504_CGC3 | CGCFAM_10381 | Yes | 10 | 1 |
Top CAZyme Families