dbCAN Logo

Cluster: HRGMv2_3504_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3504_11 HRGMv2_3504_11_17 17070 17744 + 9.B.18.1.2
pfam HRGMv2_3504_11 HRGMv2_3504_11_18 17741 18613 + 3Beta_HSD | Epimerase | RmlD_sub_bind
CAZyme HRGMv2_3504_11 HRGMv2_3504_11_19 18610 19776 + GT4
CAZyme HRGMv2_3504_11 HRGMv2_3504_11_20 19816 20547 - GT32
pfam HRGMv2_3504_11 HRGMv2_3504_11_21 20572 21801 - Cons_hypoth95 | PrmA | Methyltrans_SAM | Methyltransf_25 | Methyltransf_31 | PUA_3
NULL(UNKNOWN) HRGMv2_3504_11 HRGMv2_3504_11_22 21952 22980 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3504_11 HRGMv2_3504_11_23 23002 23505 - 2.A.88.3.1
STP HRGMv2_3504_11 HRGMv2_3504_11_24 23772 24728 + PfkB
TC HRGMv2_3504_11 HRGMv2_3504_11_25 25018 26277 + 2.A.23.2.2
NULL(UNKNOWN) HRGMv2_3504_11 HRGMv2_3504_11_26 26546 27496 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3504_11 HRGMv2_3504_11_27 27554 28792 - MFS_1 | MFS_1
TC HRGMv2_3504_11 HRGMv2_3504_11_28 28846 30177 - 1.A.26.1.2
TC HRGMv2_3504_11 HRGMv2_3504_11_29 30249 31601 - 1.A.26.1.2
STP HRGMv2_3504_11 HRGMv2_3504_11_30 31931 32509 - Fer4
TC HRGMv2_3504_11 HRGMv2_3504_11_31 32531 33517 - 3.D.1.4.1
TC HRGMv2_3504_11 HRGMv2_3504_11_32 33511 34749 - 3.D.1.4.1
pfam HRGMv2_3504_11 HRGMv2_3504_11_33 34761 35354 - Complex1_30kDa
TC HRGMv2_3504_11 HRGMv2_3504_11_34 35361 35831 - 3.D.1.4.1
NULL(UNKNOWN) HRGMv2_3504_11 HRGMv2_3504_11_35 35844 36179 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3504_11 HRGMv2_3504_11_36 36179 37744 - 3.D.1.4.1
TC HRGMv2_3504_11 HRGMv2_3504_11_37 37741 38094 - 3.D.1.4.1
TC HRGMv2_3504_11 HRGMv2_3504_11_38 38081 38596 - 3.D.1.4.1
TC HRGMv2_3504_11 HRGMv2_3504_11_39 38593 38877 - 3.D.1.4.1
TC HRGMv2_3504_11 HRGMv2_3504_11_40 38874 39134 - 3.D.1.4.1
pfam HRGMv2_3504_11 HRGMv2_3504_11_41 39137 39553 - PhaG_MnhG_YufB
TC HRGMv2_3504_11 HRGMv2_3504_11_42 39550 39822 - 3.D.1.4.1
TC HRGMv2_3504_11 HRGMv2_3504_11_43 39819 40307 - 3.D.1.4.1
Gene ID: HRGMv2_3504_11_17
Type: TC
Location: 17070 - 17744 (+)
Gene ID: HRGMv2_3504_11_18
Type: pfam
Location: 17741 - 18613 (+)
Gene ID: HRGMv2_3504_11_19
Type: CAZyme
Location: 18610 - 19776 (+)
Gene ID: HRGMv2_3504_11_20
Type: CAZyme
Location: 19816 - 20547 (-)
Gene ID: HRGMv2_3504_11_21
Type: pfam
Location: 20572 - 21801 (-)
Gene ID: HRGMv2_3504_11_22
Type:
Location: 21952 - 22980 (-)
Gene ID: HRGMv2_3504_11_23
Type: TC
Location: 23002 - 23505 (-)
Gene ID: HRGMv2_3504_11_24
Type: STP
Location: 23772 - 24728 (+)
Gene ID: HRGMv2_3504_11_25
Type: TC
Location: 25018 - 26277 (+)
Gene ID: HRGMv2_3504_11_26
Type:
Location: 26546 - 27496 (-)
Gene ID: HRGMv2_3504_11_27
Type: pfam
Location: 27554 - 28792 (-)
Gene ID: HRGMv2_3504_11_28
Type: TC
Location: 28846 - 30177 (-)
Gene ID: HRGMv2_3504_11_29
Type: TC
Location: 30249 - 31601 (-)
Gene ID: HRGMv2_3504_11_30
Type: STP
Location: 31931 - 32509 (-)
Gene ID: HRGMv2_3504_11_31
Type: TC
Location: 32531 - 33517 (-)
Gene ID: HRGMv2_3504_11_32
Type: TC
Location: 33511 - 34749 (-)
Gene ID: HRGMv2_3504_11_33
Type: pfam
Location: 34761 - 35354 (-)
Gene ID: HRGMv2_3504_11_34
Type: TC
Location: 35361 - 35831 (-)
Gene ID: HRGMv2_3504_11_35
Type:
Location: 35844 - 36179 (-)
Gene ID: HRGMv2_3504_11_36
Type: TC
Location: 36179 - 37744 (-)
Gene ID: HRGMv2_3504_11_37
Type: TC
Location: 37741 - 38094 (-)
Gene ID: HRGMv2_3504_11_38
Type: TC
Location: 38081 - 38596 (-)
Gene ID: HRGMv2_3504_11_39
Type: TC
Location: 38593 - 38877 (-)
Gene ID: HRGMv2_3504_11_40
Type: TC
Location: 38874 - 39134 (-)
Gene ID: HRGMv2_3504_11_41
Type: pfam
Location: 39137 - 39553 (-)
Gene ID: HRGMv2_3504_11_42
Type: TC
Location: 39550 - 39822 (-)
Gene ID: HRGMv2_3504_11_43
Type: TC
Location: 39819 - 40307 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List