Genome Details
Selected Rep_genome_ID: HRGMv2_2825
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1312
Species
UMGS1312 sp900550625
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG482_99 | 2,068,284 | 97.76% | 0% | NA | Africa | H3AfricaPhase2 |
| CGMR049664 | 1,990,366 | 97.49% | 0% | China | Asia | CGMR |
| HRGMv2_2825 | 2,182,339 | 97.76% | 0% | South Korea | Asia | HRGM |
| MGYG000003973 | 2,032,778 | 97.76% | 0% | United Kingdom | Europe | UHGG |
| Rep_2688 | 2,119,878 | 96.085% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2825_CGC12 | CGCFAM_00006 | Yes | 11 | 7 | |
| HRGMv2_2825_CGC4 | CGCFAM_00776 | Yes | 4 | 1 | |
| HRGMv2_2825_CGC18 | CGCFAM_01222 | Yes | 7 | 1 | |
| HRGMv2_2825_CGC19 | CGCFAM_03753 | Yes | 3 | 1 | |
| HRGMv2_2825_CGC1 | CGCFAM_03868 | Yes | 4 | 1 | |
| HRGMv2_2825_CGC26 | CGCFAM_06176 | Yes | 4 | 1 | |
| HRGMv2_2825_CGC13 | CGCFAM_06781 | Yes | 4 | 1 | |
| HRGMv2_2825_CGC14 | CGCFAM_07697 | Yes | 3 | 1 |
Top CAZyme Families