Cluster: HRGMv2_2825_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2825
- CGC Family ID: CGCFAM_06781
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2825_25 | HRGMv2_2825_25_9 | 6998 | 7690 | + | 1.C.82.1.1 |
| pfam | HRGMv2_2825_25 | HRGMv2_2825_25_10 | 8478 | 8921 | - | DUF4234 |
| pfam | HRGMv2_2825_25 | HRGMv2_2825_25_11 | 9655 | 11712 | + | GTP_EFTU | EFG_C | EFG_IV | EFG_III | EF-G_D2 |
| CAZyme | HRGMv2_2825_25 | HRGMv2_2825_25_12 | 12346 | 14562 | - | GH163 |
Gene ID: HRGMv2_2825_25_9
Type: TC
Location: 6998 - 7690 (+)
Type: TC
Location: 6998 - 7690 (+)
Gene ID: HRGMv2_2825_25_10
Type: pfam
Location: 8478 - 8921 (-)
Type: pfam
Location: 8478 - 8921 (-)
Gene ID: HRGMv2_2825_25_11
Type: pfam
Location: 9655 - 11712 (+)
Type: pfam
Location: 9655 - 11712 (+)
Gene ID: HRGMv2_2825_25_12
Type: CAZyme
Location: 12346 - 14562 (-)
Type: CAZyme
Location: 12346 - 14562 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1312
Species
UMGS1312 sp900550625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2825_25_11 | vegan > omnivore | 1.11331 | 0.00694 |