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Cluster: HRGMv2_2825_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2825_24 HRGMv2_2825_24_15 14922 15539 + 9.B.18.1.3
CAZyme HRGMv2_2825_24 HRGMv2_2825_24_16 15536 16639 + GT4
TC HRGMv2_2825_24 HRGMv2_2825_24_17 16636 17739 + 9.B.183.1.9
CAZyme HRGMv2_2825_24 HRGMv2_2825_24_18 17753 18850 + GT4
CAZyme HRGMv2_2825_24 HRGMv2_2825_24_19 18834 19730 + GT2
pfam HRGMv2_2825_24 HRGMv2_2825_24_20 19730 20548 + LicD
pfam HRGMv2_2825_24 HRGMv2_2825_24_21 20721 21272 + Hexapep | Hexapep_2
CAZyme HRGMv2_2825_24 HRGMv2_2825_24_22 21269 22459 + GT4
CAZyme HRGMv2_2825_24 HRGMv2_2825_24_23 22463 23158 + GT32
CAZyme HRGMv2_2825_24 HRGMv2_2825_24_24 23170 24177 + GT2
CAZyme HRGMv2_2825_24 HRGMv2_2825_24_25 24183 25334 + GT4
Gene ID: HRGMv2_2825_24_15
Type: TC
Location: 14922 - 15539 (+)
Gene ID: HRGMv2_2825_24_16
Type: CAZyme
Location: 15536 - 16639 (+)
Gene ID: HRGMv2_2825_24_17
Type: TC
Location: 16636 - 17739 (+)
Gene ID: HRGMv2_2825_24_18
Type: CAZyme
Location: 17753 - 18850 (+)
Gene ID: HRGMv2_2825_24_19
Type: CAZyme
Location: 18834 - 19730 (+)
Gene ID: HRGMv2_2825_24_20
Type: pfam
Location: 19730 - 20548 (+)
Gene ID: HRGMv2_2825_24_21
Type: pfam
Location: 20721 - 21272 (+)
Gene ID: HRGMv2_2825_24_22
Type: CAZyme
Location: 21269 - 22459 (+)
Gene ID: HRGMv2_2825_24_23
Type: CAZyme
Location: 22463 - 23158 (+)
Gene ID: HRGMv2_2825_24_24
Type: CAZyme
Location: 23170 - 24177 (+)
Gene ID: HRGMv2_2825_24_25
Type: CAZyme
Location: 24183 - 25334 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS1312
→
Species
UMGS1312 sp900550625

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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