Genome Details
Selected Rep_genome_ID: HRGMv2_2785
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS172
Species
UMGS172 sp900539855
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR038840 | 1,912,064 | 97.32% | 0% | China | Asia | CGMR |
| GCA_021623875.1_ASM2162387v1_genomic | 1,802,195 | 91.95% | 0.67% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_2785 | 1,823,776 | 97.31% | 0% | UK | Europe | HRGM |
| MGYG000001860 | 1,972,754 | 97.32% | 0% | Denmark | Europe | UHGG |
| Rep_3560 | 1,893,730 | 95.9732% | 0% | NA | NA | WIS |
| SW163_bin.41 | 1,678,695 | 93.74% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2785_CGC14 | CGCFAM_00004 | Yes | 5 | 2 | alpha-glucan |
| HRGMv2_2785_CGC13 | CGCFAM_00263 | Yes | 7 | 1 | |
| HRGMv2_2785_CGC2 | CGCFAM_02261 | Yes | 3 | 1 | |
| HRGMv2_2785_CGC4 | CGCFAM_04531 | Yes | 4 | 1 | |
| HRGMv2_2785_CGC8 | CGCFAM_09480 | Yes | 8 | 1 |
Top CAZyme Families