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Cluster: HRGMv2_2785_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2785_21 HRGMv2_2785_21_15 17472 18557 + GH179
pfam HRGMv2_2785_21 HRGMv2_2785_21_16 18578 19516 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
pfam HRGMv2_2785_21 HRGMv2_2785_21_17 19795 20163 - Flg_new
TC HRGMv2_2785_21 HRGMv2_2785_21_18 20181 21266 - 3.A.1.2.3
TC HRGMv2_2785_21 HRGMv2_2785_21_19 21279 22814 - 3.A.1.2.3
TC HRGMv2_2785_21 HRGMv2_2785_21_20 22889 23956 - 3.A.1.2.3
TC HRGMv2_2785_21 HRGMv2_2785_21_21 24262 25881 - 2.A.36.6.11
Gene ID: HRGMv2_2785_21_15
Type: CAZyme
Location: 17472 - 18557 (+)
Gene ID: HRGMv2_2785_21_16
Type: pfam
Location: 18578 - 19516 (+)
Gene ID: HRGMv2_2785_21_17
Type: pfam
Location: 19795 - 20163 (-)
Gene ID: HRGMv2_2785_21_18
Type: TC
Location: 20181 - 21266 (-)
Gene ID: HRGMv2_2785_21_19
Type: TC
Location: 21279 - 22814 (-)
Gene ID: HRGMv2_2785_21_20
Type: TC
Location: 22889 - 23956 (-)
Gene ID: HRGMv2_2785_21_21
Type: TC
Location: 24262 - 25881 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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