Cluster: HRGMv2_2785_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2785
- CGC Family ID: CGCFAM_00004
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2785_23 | HRGMv2_2785_23_11 | 11712 | 13133 | - | GT5 |
| pfam | HRGMv2_2785_23 | HRGMv2_2785_23_12 | 13155 | 14273 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_2785_23 | HRGMv2_2785_23_13 | 14270 | 15487 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_2785_23 | HRGMv2_2785_23_14 | 15484 | 17397 | - | CBM48 | GH13_9 |
| TC | HRGMv2_2785_23 | HRGMv2_2785_23_15 | 17667 | 20279 | - | 3.A.9.1.2 |
Gene ID: HRGMv2_2785_23_11
Type: CAZyme
Location: 11712 - 13133 (-)
Type: CAZyme
Location: 11712 - 13133 (-)
Gene ID: HRGMv2_2785_23_12
Type: pfam
Location: 13155 - 14273 (-)
Type: pfam
Location: 13155 - 14273 (-)
Gene ID: HRGMv2_2785_23_13
Type: pfam
Location: 14270 - 15487 (-)
Type: pfam
Location: 14270 - 15487 (-)
Gene ID: HRGMv2_2785_23_14
Type: CAZyme
Location: 15484 - 17397 (-)
Type: CAZyme
Location: 15484 - 17397 (-)
Gene ID: HRGMv2_2785_23_15
Type: TC
Location: 17667 - 20279 (-)
Type: TC
Location: 17667 - 20279 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS172
Species
UMGS172 sp900539855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.