Genome Details
Selected Rep_genome_ID: HRGMv2_2008
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
RUG841
Species
RUG841 sp900772035
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| GCA_021616505.1_ASM2161650v1_genomic | 1,876,080 | 90.31% | 0.85% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_2008 | 1,952,424 | 100% | 1.72% | Tanzania | Africa | HRGM |
| MGYG000004613 | 2,009,120 | 90.31% | 0.85% | France | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2008_CGC8 | CGCFAM_00643 | Yes | 5 | 1 | |
| HRGMv2_2008_CGC13 | CGCFAM_01721 | Yes | 3 | 1 | |
| HRGMv2_2008_CGC4 | CGCFAM_01767 | Yes | 4 | 1 | |
| HRGMv2_2008_CGC10 | CGCFAM_02183 | Yes | 4 | 1 | |
| HRGMv2_2008_CGC6 | CGCFAM_02561 | Yes | 5 | 1 | |
| HRGMv2_2008_CGC1 | CGCFAM_06086 | Yes | 6 | 1 |
Top CAZyme Families