Genome Details
Selected Rep_genome_ID: HRGMv2_1754
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales_A
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_N
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG010_16_sub | 1,769,522 | 90.94% | 4.5% | NA | Africa | H3AfricaPhase2 |
| GibsonMK_2016_SRR3131911_bin.1 | 1,938,960 | 99.43% | 0.136% | US | North America | ELGG |
| HRGMv2_1754 | 1,993,289 | 99.79% | 0% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1754_CGC15 | CGCFAM_01708 | Yes | 10 | 4 | |
| HRGMv2_1754_CGC14 | CGCFAM_03702 | Yes | 4 | 1 |
Top CAZyme Families