Cluster: HRGMv2_1754_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1754
- CGC Family ID: CGCFAM_03702
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1754_6 | HRGMv2_1754_6_97 | 97785 | 99074 | + | 2.A.1.7.1 |
| pfam | HRGMv2_1754_6 | HRGMv2_1754_6_98 | 99157 | 100311 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| peptidase | HRGMv2_1754_6 | HRGMv2_1754_6_99 | 100505 | 102142 | + | C26.964 |
| CAZyme | HRGMv2_1754_6 | HRGMv2_1754_6_100 | 102265 | 103200 | + | GT2 |
Gene ID: HRGMv2_1754_6_97
Type: TC
Location: 97785 - 99074 (+)
Type: TC
Location: 97785 - 99074 (+)
Gene ID: HRGMv2_1754_6_98
Type: pfam
Location: 99157 - 100311 (+)
Type: pfam
Location: 99157 - 100311 (+)
Gene ID: HRGMv2_1754_6_99
Type: peptidase
Location: 100505 - 102142 (+)
Type: peptidase
Location: 100505 - 102142 (+)
Gene ID: HRGMv2_1754_6_100
Type: CAZyme
Location: 102265 - 103200 (+)
Type: CAZyme
Location: 102265 - 103200 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.