Genome Details
Selected Rep_genome_ID: HRGMv2_1498
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_1498 | 2,182,210 | 94.35% | 0% | Tanzania | Africa | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1498_CGC20 | CGCFAM_00002 | Yes | 5 | 3 | |
| HRGMv2_1498_CGC11 | CGCFAM_00014 | Yes | 10 | 2 | host glycan |
| HRGMv2_1498_CGC3 | CGCFAM_00019 | Yes | 10 | 1 | |
| HRGMv2_1498_CGC1 | CGCFAM_00969 | Yes | 5 | 1 |
Top CAZyme Families