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Cluster: HRGMv2_1498_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1498_1 HRGMv2_1498_1_97 105406 107748 - 3.A.3.5.15
STP HRGMv2_1498_1 HRGMv2_1498_1_98 108081 110165 - Pkinase
STP HRGMv2_1498_1 HRGMv2_1498_1_99 110337 111299 - FHA
TC HRGMv2_1498_1 HRGMv2_1498_1_100 111899 114148 + 1.I.1.1.3
TC HRGMv2_1498_1 HRGMv2_1498_1_101 114524 115036 + 4.A.1.2.5
pfam HRGMv2_1498_1 HRGMv2_1498_1_102 115043 115909 + PRD | PRD | CAT_RBD
TC HRGMv2_1498_1 HRGMv2_1498_1_103 116009 117625 + 4.A.1.1.3
CAZyme HRGMv2_1498_1 HRGMv2_1498_1_104 117629 119011 + GH4
STP HRGMv2_1498_1 HRGMv2_1498_1_105 119268 121100 + Pyr_redox_2
TC HRGMv2_1498_1 HRGMv2_1498_1_106 121094 122905 + 3.D.1.5.1
Gene ID: HRGMv2_1498_1_97
Type: TC
Location: 105406 - 107748 (-)
Gene ID: HRGMv2_1498_1_98
Type: STP
Location: 108081 - 110165 (-)
Gene ID: HRGMv2_1498_1_99
Type: STP
Location: 110337 - 111299 (-)
Gene ID: HRGMv2_1498_1_100
Type: TC
Location: 111899 - 114148 (+)
Gene ID: HRGMv2_1498_1_101
Type: TC
Location: 114524 - 115036 (+)
Gene ID: HRGMv2_1498_1_102
Type: pfam
Location: 115043 - 115909 (+)
Gene ID: HRGMv2_1498_1_103
Type: TC
Location: 116009 - 117625 (+)
Gene ID: HRGMv2_1498_1_104
Type: CAZyme
Location: 117629 - 119011 (+)
Gene ID: HRGMv2_1498_1_105
Type: STP
Location: 119268 - 121100 (+)
Gene ID: HRGMv2_1498_1_106
Type: TC
Location: 121094 - 122905 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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