Genome Details
Selected Rep_genome_ID: HRGMv2_1056
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp003466125
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR041471 | 2,123,639 | 99.19% | 0.81% | China | Asia | CGMR |
| HRGMv2_1056 | 2,196,186 | 100% | 0.806% | China | Asia | HRGM |
| SPMP46_bin.63 | 2,209,320 | 99.8% | 0.97% | Singapore | Asia | SPMP |
| SPMP72_bin.74 | 2,108,888 | 97.58% | 0.81% | Singapore | Asia | SPMP |
| SPMP92_bin.38 | 2,094,782 | 95.51% | 4.03% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1056_CGC7 | CGCFAM_00230 | Yes | 13 | 2 | |
| HRGMv2_1056_CGC8 | CGCFAM_03592 | Yes | 8 | 3 |
Top CAZyme Families