Genome Details
Selected Rep_genome_ID: HRGMv2_1030
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_1030 | 2,290,060 | 91.93% | 1.612% | Cameroon | Africa | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1030_CGC3 | CGCFAM_00008 | Yes | 5 | 2 | |
| HRGMv2_1030_CGC6 | CGCFAM_00020 | Yes | 6 | 1 | host glycan/beta-glucan |
| HRGMv2_1030_CGC9 | CGCFAM_00024 | Yes | 13 | 1 | |
| HRGMv2_1030_CGC12 | CGCFAM_01504 | Yes | 11 | 5 |
Top CAZyme Families