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Cluster: HRGMv2_1030_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1030_6 HRGMv2_1030_6_1 61 828 - 1.A.23.4.2
NULL(UNKNOWN) HRGMv2_1030_6 HRGMv2_1030_6_2 854 1006 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1030_6 HRGMv2_1030_6_3 1163 1957 - 3.A.1.34.1
TC HRGMv2_1030_6 HRGMv2_1030_6_4 1950 2873 - 3.A.1.34.1
TC HRGMv2_1030_6 HRGMv2_1030_6_5 3063 4043 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_1030_6 HRGMv2_1030_6_6 4204 4989 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1030_6 HRGMv2_1030_6_7 5239 6642 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_1030_6 HRGMv2_1030_6_8 6823 7386 - 4.A.1.2.6
peptidase HRGMv2_1030_6 HRGMv2_1030_6_9 7631 8530 + S09.UPW
NULL(UNKNOWN) HRGMv2_1030_6 HRGMv2_1030_6_10 8578 8898 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1030_6 HRGMv2_1030_6_11 9020 11380 + 9.A.8.1.6
TC HRGMv2_1030_6 HRGMv2_1030_6_12 11502 12698 + 2.A.1.2.18
CAZyme HRGMv2_1030_6 HRGMv2_1030_6_13 12881 14257 + GH13_20
Gene ID: HRGMv2_1030_6_1
Type: TC
Location: 61 - 828 (-)
Gene ID: HRGMv2_1030_6_2
Type:
Location: 854 - 1006 (-)
Gene ID: HRGMv2_1030_6_3
Type: TC
Location: 1163 - 1957 (-)
Gene ID: HRGMv2_1030_6_4
Type: TC
Location: 1950 - 2873 (-)
Gene ID: HRGMv2_1030_6_5
Type: TC
Location: 3063 - 4043 (-)
Gene ID: HRGMv2_1030_6_6
Type:
Location: 4204 - 4989 (-)
Gene ID: HRGMv2_1030_6_7
Type: pfam
Location: 5239 - 6642 (-)
Gene ID: HRGMv2_1030_6_8
Type: TC
Location: 6823 - 7386 (-)
Gene ID: HRGMv2_1030_6_9
Type: peptidase
Location: 7631 - 8530 (+)
Gene ID: HRGMv2_1030_6_10
Type:
Location: 8578 - 8898 (+)
Gene ID: HRGMv2_1030_6_11
Type: TC
Location: 9020 - 11380 (+)
Gene ID: HRGMv2_1030_6_12
Type: TC
Location: 11502 - 12698 (+)
Gene ID: HRGMv2_1030_6_13
Type: CAZyme
Location: 12881 - 14257 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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