Genome Details
Selected Rep_genome_ID: HRGMv2_1029
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_1029 | 2,301,052 | 100% | 1.075% | Cameroon | Africa | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1029_CGC6 | CGCFAM_00012 | Yes | 4 | 2 | host glycan/beta-glucan |
| HRGMv2_1029_CGC10 | CGCFAM_00019 | Yes | 8 | 1 | |
| HRGMv2_1029_CGC14 | CGCFAM_00024 | Yes | 13 | 1 | |
| HRGMv2_1029_CGC2 | CGCFAM_00413 | Yes | 5 | 2 |
Top CAZyme Families