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Cluster: HRGMv2_1029_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1029_21 HRGMv2_1029_21_29 33410 34786 - GH13_20
TC HRGMv2_1029_21 HRGMv2_1029_21_30 35252 36448 - 2.A.1.2.18
pfam HRGMv2_1029_21 HRGMv2_1029_21_31 36552 37034 - tRNA_edit
TC HRGMv2_1029_21 HRGMv2_1029_21_32 37130 39487 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_1029_21 HRGMv2_1029_21_33 39609 39929 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_1029_21 HRGMv2_1029_21_34 39977 40876 - S09.UPW
TC HRGMv2_1029_21 HRGMv2_1029_21_35 41045 41686 + 4.A.1.2.6
TC HRGMv2_1029_21 HRGMv2_1029_21_36 41922 43856 + 9.B.97.5.1
pfam HRGMv2_1029_21 HRGMv2_1029_21_37 43993 45396 + tRNA-synt_2 | tRNA_anti-codon
pfam HRGMv2_1029_21 HRGMv2_1029_21_38 45647 46435 + WYL
TC HRGMv2_1029_21 HRGMv2_1029_21_39 46595 47575 + 3.A.1.34.1
TC HRGMv2_1029_21 HRGMv2_1029_21_40 47780 48703 + 3.A.1.34.1
TC HRGMv2_1029_21 HRGMv2_1029_21_41 48696 49490 + 3.A.1.34.1
Gene ID: HRGMv2_1029_21_29
Type: CAZyme
Location: 33410 - 34786 (-)
Gene ID: HRGMv2_1029_21_30
Type: TC
Location: 35252 - 36448 (-)
Gene ID: HRGMv2_1029_21_31
Type: pfam
Location: 36552 - 37034 (-)
Gene ID: HRGMv2_1029_21_32
Type: TC
Location: 37130 - 39487 (-)
Gene ID: HRGMv2_1029_21_33
Type:
Location: 39609 - 39929 (-)
Gene ID: HRGMv2_1029_21_34
Type: peptidase
Location: 39977 - 40876 (-)
Gene ID: HRGMv2_1029_21_35
Type: TC
Location: 41045 - 41686 (+)
Gene ID: HRGMv2_1029_21_36
Type: TC
Location: 41922 - 43856 (+)
Gene ID: HRGMv2_1029_21_37
Type: pfam
Location: 43993 - 45396 (+)
Gene ID: HRGMv2_1029_21_38
Type: pfam
Location: 45647 - 46435 (+)
Gene ID: HRGMv2_1029_21_39
Type: TC
Location: 46595 - 47575 (+)
Gene ID: HRGMv2_1029_21_40
Type: TC
Location: 47780 - 48703 (+)
Gene ID: HRGMv2_1029_21_41
Type: TC
Location: 48696 - 49490 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1029_21_36 vegan > omnivore 1.29218 0.01287
HRGMv2_1029_21_36 vegetarian > omnivore 1.52829 0.03331

🧭 Explore Read Mapping of CGC

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