Genome Details
Selected Rep_genome_ID: HRGMv2_0969
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0969 | 2,340,996 | 100% | 0.806% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0969_CGC20 | CGCFAM_00002 | Yes | 7 | 4 | |
| HRGMv2_0969_CGC11 | CGCFAM_00006 | Yes | 9 | 4 | |
| HRGMv2_0969_CGC3 | CGCFAM_00014 | Yes | 14 | 3 | host glycan |
Top CAZyme Families