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Cluster: HRGMv2_0969_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0969_9 HRGMv2_0969_9_28 28266 29267 - GT2
pfam HRGMv2_0969_9 HRGMv2_0969_9_29 29270 29980 - Hexapep | Hexapep_2
CAZyme HRGMv2_0969_9 HRGMv2_0969_9_30 29996 31033 - GT2
pfam HRGMv2_0969_9 HRGMv2_0969_9_31 31049 31603 - Hexapep_2
pfam HRGMv2_0969_9 HRGMv2_0969_9_32 31587 32462 - LicD
CAZyme HRGMv2_0969_9 HRGMv2_0969_9_33 32464 33573 - GT4
pfam HRGMv2_0969_9 HRGMv2_0969_9_34 33570 34679 - Epimerase_2
CAZyme HRGMv2_0969_9 HRGMv2_0969_9_35 34672 35478 - GT26
TC HRGMv2_0969_9 HRGMv2_0969_9_36 35465 36178 - 9.B.18.1.2
Gene ID: HRGMv2_0969_9_28
Type: CAZyme
Location: 28266 - 29267 (-)
Gene ID: HRGMv2_0969_9_29
Type: pfam
Location: 29270 - 29980 (-)
Gene ID: HRGMv2_0969_9_30
Type: CAZyme
Location: 29996 - 31033 (-)
Gene ID: HRGMv2_0969_9_31
Type: pfam
Location: 31049 - 31603 (-)
Gene ID: HRGMv2_0969_9_32
Type: pfam
Location: 31587 - 32462 (-)
Gene ID: HRGMv2_0969_9_33
Type: CAZyme
Location: 32464 - 33573 (-)
Gene ID: HRGMv2_0969_9_34
Type: pfam
Location: 33570 - 34679 (-)
Gene ID: HRGMv2_0969_9_35
Type: CAZyme
Location: 34672 - 35478 (-)
Gene ID: HRGMv2_0969_9_36
Type: TC
Location: 35465 - 36178 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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