Genome Details
Selected Rep_genome_ID: HRGMv2_0877
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp958435945
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0877 | 2,195,878 | 100% | 0.806% | Italy | Europe | HRGM |
| MGYG000001842 | 2,095,913 | 100% | 0.81% | Denmark | Europe | UHGG |
| MGYG000002757 | 2,128,452 | 100% | 0.81% | Netherlands | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0877_CGC5 | CGCFAM_00014 | Yes | 10 | 2 | host glycan |
| HRGMv2_0877_CGC12 | CGCFAM_00049 | Yes | 11 | 4 |
Top CAZyme Families