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Cluster: HRGMv2_0877_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0877_4 HRGMv2_0877_4_20 19602 20084 + 4.A.6.1.14
sulfatase HRGMv2_0877_4 HRGMv2_0877_4_21 20411 21463 - S1_4
TF HRGMv2_0877_4 HRGMv2_0877_4_22 21670 22434 + HTH_DeoR
CAZyme HRGMv2_0877_4 HRGMv2_0877_4_23 22632 24053 - GH1
TC HRGMv2_0877_4 HRGMv2_0877_4_24 24130 25908 - 4.A.3.1.1
TF HRGMv2_0877_4 HRGMv2_0877_4_25 26184 27194 + LacI
CAZyme HRGMv2_0877_4 HRGMv2_0877_4_26 27469 28908 - GH1
TC HRGMv2_0877_4 HRGMv2_0877_4_27 28975 30741 - 4.A.3.1.1
TF HRGMv2_0877_4 HRGMv2_0877_4_28 31099 32103 + LacI
TC HRGMv2_0877_4 HRGMv2_0877_4_29 32318 32656 + 4.A.3.1.2
Gene ID: HRGMv2_0877_4_20
Type: TC
Location: 19602 - 20084 (+)
Gene ID: HRGMv2_0877_4_21
Type: sulfatase
Location: 20411 - 21463 (-)
Gene ID: HRGMv2_0877_4_22
Type: TF
Location: 21670 - 22434 (+)
Gene ID: HRGMv2_0877_4_23
Type: CAZyme
Location: 22632 - 24053 (-)
Gene ID: HRGMv2_0877_4_24
Type: TC
Location: 24130 - 25908 (-)
Gene ID: HRGMv2_0877_4_25
Type: TF
Location: 26184 - 27194 (+)
Gene ID: HRGMv2_0877_4_26
Type: CAZyme
Location: 27469 - 28908 (-)
Gene ID: HRGMv2_0877_4_27
Type: TC
Location: 28975 - 30741 (-)
Gene ID: HRGMv2_0877_4_28
Type: TF
Location: 31099 - 32103 (+)
Gene ID: HRGMv2_0877_4_29
Type: TC
Location: 32318 - 32656 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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