Genome Details
Selected Rep_genome_ID: HRGMv2_0867
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AM
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0867 | 2,150,947 | 100% | 0.806% | Thailand | Asia | HRGM |
| HRGMv2_1473 | 2,087,998 | 97.58% | 0.806% | Japan | Asia | HRGM |
| MurphyR_2019_SRR7351677_bin.8 | 2,112,141 | 97.58% | 2.419% | New_Zealand | Oceania | ELGG |
| SPMP10_bin.21 | 2,351,985 | 98.79% | 3.23% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0867_CGC2 | CGCFAM_00011 | Yes | 5 | 3 | |
| HRGMv2_0867_CGC3 | CGCFAM_00019 | Yes | 6 | 1 |
Top CAZyme Families