Genome Details
Selected Rep_genome_ID: HRGMv2_0611
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Oxalobacter
Species
Oxalobacter formigenes
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR014924 | 2,310,259 | 99.04% | 0.72% | China | Asia | CGMR |
| HRGMv2_0611 | 2,483,577 | 99.51% | 0.48% | South Korea | Asia | HRGM |
| Rep_656 | 2,200,022 | 96.7548% | 0.99359% | NA | NA | WIS |
| SPMP27_bin.16 | 2,263,000 | 95.11% | 0.82% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0611_CGC10 | CGCFAM_00568 | Yes | 17 | 6 | |
| HRGMv2_0611_CGC7 | CGCFAM_02766 | Yes | 15 | 1 | |
| HRGMv2_0611_CGC12 | CGCFAM_08436 | Yes | 7 | 1 |
Top CAZyme Families