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Cluster: HRGMv2_0611_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0611_2 HRGMv2_0611_2_165 169107 169406 + 3.A.23.2.1
NULL(UNKNOWN) HRGMv2_0611_2 HRGMv2_0611_2_166 169528 170235 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0611_2 HRGMv2_0611_2_167 170718 171314 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0611_2 HRGMv2_0611_2_168 171592 171906 + 2.A.7.1.10
TC HRGMv2_0611_2 HRGMv2_0611_2_169 172033 173010 - 8.A.5.1.4
TC HRGMv2_0611_2 HRGMv2_0611_2_170 173242 174225 - 8.A.5.1.4
CAZyme HRGMv2_0611_2 HRGMv2_0611_2_171 174302 176089 - GH15
pfam HRGMv2_0611_2 HRGMv2_0611_2_172 176086 176904 - Trehalose_PPase
pfam HRGMv2_0611_2 HRGMv2_0611_2_173 177180 177782 + SNase
TC HRGMv2_0611_2 HRGMv2_0611_2_174 178202 182398 + 1.B.12.5.4
TC HRGMv2_0611_2 HRGMv2_0611_2_175 182512 183699 - 2.A.1.2.14
TC HRGMv2_0611_2 HRGMv2_0611_2_176 183861 185033 - 2.A.1.2.14
NULL(UNKNOWN) HRGMv2_0611_2 HRGMv2_0611_2_177 185419 185835 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0611_2 HRGMv2_0611_2_178 185832 185975 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0611_2 HRGMv2_0611_2_179 187207 188319 - 1.A.35.3.2
Gene ID: HRGMv2_0611_2_165
Type: TC
Location: 169107 - 169406 (+)
Gene ID: HRGMv2_0611_2_166
Type:
Location: 169528 - 170235 (-)
Gene ID: HRGMv2_0611_2_167
Type:
Location: 170718 - 171314 (+)
Gene ID: HRGMv2_0611_2_168
Type: TC
Location: 171592 - 171906 (+)
Gene ID: HRGMv2_0611_2_169
Type: TC
Location: 172033 - 173010 (-)
Gene ID: HRGMv2_0611_2_170
Type: TC
Location: 173242 - 174225 (-)
Gene ID: HRGMv2_0611_2_171
Type: CAZyme
Location: 174302 - 176089 (-)
Gene ID: HRGMv2_0611_2_172
Type: pfam
Location: 176086 - 176904 (-)
Gene ID: HRGMv2_0611_2_173
Type: pfam
Location: 177180 - 177782 (+)
Gene ID: HRGMv2_0611_2_174
Type: TC
Location: 178202 - 182398 (+)
Gene ID: HRGMv2_0611_2_175
Type: TC
Location: 182512 - 183699 (-)
Gene ID: HRGMv2_0611_2_176
Type: TC
Location: 183861 - 185033 (-)
Gene ID: HRGMv2_0611_2_177
Type:
Location: 185419 - 185835 (+)
Gene ID: HRGMv2_0611_2_178
Type:
Location: 185832 - 185975 (+)
Gene ID: HRGMv2_0611_2_179
Type: TC
Location: 187207 - 188319 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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