Genome Details
Selected Rep_genome_ID: HRGMv2_0555
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Brachyspirae
Order
Brachyspirales
Family
Brachyspiraceae
Genus
Brachyspira
Species
Brachyspira aalborgi
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| BF164_82 | 2,493,978 | 99.2% | 0% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_0555 | 2,554,552 | 100% | 0% | Japan | Asia | HRGM |
| MGYG000000502 | 2,577,668 | 99.2% | 0% | Fiji | Oceania | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_A_15_1703.123 | 2,620,952 | 99.2% | 0% | NA | Africa | Hadza |
| SPMP06_bin.88 | 2,647,055 | 94.93% | 1.2% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0555_CGC12 | CGCFAM_00012 | Yes | 5 | 2 | host glycan/beta-glucan |
| HRGMv2_0555_CGC19 | CGCFAM_01093 | Yes | 5 | 1 | |
| HRGMv2_0555_CGC23 | CGCFAM_01455 | Yes | 3 | 2 | |
| HRGMv2_0555_CGC27 | CGCFAM_01507 | Yes | 7 | 2 | |
| HRGMv2_0555_CGC31 | CGCFAM_01508 | Yes | 4 | 1 | |
| HRGMv2_0555_CGC11 | CGCFAM_02511 | Yes | 5 | 2 | |
| HRGMv2_0555_CGC18 | CGCFAM_04412 | Yes | 4 | 1 | |
| HRGMv2_0555_CGC24 | CGCFAM_09719 | Yes | 3 | 1 | |
| HRGMv2_0555_CGC6 | CGCFAM_09720 | Yes | 4 | 1 |
Top CAZyme Families