Cluster: HRGMv2_0555_CGC27
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0555
- CGC Family ID: CGCFAM_01507
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0555_75 | HRGMv2_0555_75_4 | 2595 | 3971 | + | 9.A.40.2.4 |
| pfam | HRGMv2_0555_75 | HRGMv2_0555_75_5 | 3971 | 5092 | + | PGA_cap |
| NULL(UNKNOWN) | HRGMv2_0555_75 | HRGMv2_0555_75_6 | 5306 | 5680 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0555_75 | HRGMv2_0555_75_7 | 5968 | 6747 | - | GT2 |
| pfam | HRGMv2_0555_75 | HRGMv2_0555_75_8 | 6740 | 7585 | - | AP_endonuc_2 |
| NULL(UNKNOWN) | HRGMv2_0555_75 | HRGMv2_0555_75_9 | 7585 | 7755 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0555_75 | HRGMv2_0555_75_10 | 7796 | 8599 | - | GT2 |
Gene ID: HRGMv2_0555_75_4
Type: TC
Location: 2595 - 3971 (+)
Type: TC
Location: 2595 - 3971 (+)
Gene ID: HRGMv2_0555_75_5
Type: pfam
Location: 3971 - 5092 (+)
Type: pfam
Location: 3971 - 5092 (+)
Gene ID: HRGMv2_0555_75_6
Type:
Location: 5306 - 5680 (+)
Type:
Location: 5306 - 5680 (+)
Gene ID: HRGMv2_0555_75_7
Type: CAZyme
Location: 5968 - 6747 (-)
Type: CAZyme
Location: 5968 - 6747 (-)
Gene ID: HRGMv2_0555_75_8
Type: pfam
Location: 6740 - 7585 (-)
Type: pfam
Location: 6740 - 7585 (-)
Gene ID: HRGMv2_0555_75_9
Type:
Location: 7585 - 7755 (-)
Type:
Location: 7585 - 7755 (-)
Gene ID: HRGMv2_0555_75_10
Type: CAZyme
Location: 7796 - 8599 (-)
Type: CAZyme
Location: 7796 - 8599 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Brachyspirae
Order
Brachyspirales
Family
Brachyspiraceae
Genus
Brachyspira
Species
Brachyspira aalborgi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.