Cluster: HRGMv2_0555_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_0555
- CGC Family ID: CGCFAM_00012
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0555_19 | HRGMv2_0555_19_3 | 4878 | 6212 | - | 4.A.3.2.3 |
| TC | HRGMv2_0555_19 | HRGMv2_0555_19_4 | 6259 | 6594 | - | 4.A.3.2.2 |
| CAZyme | HRGMv2_0555_19 | HRGMv2_0555_19_5 | 6615 | 7697 | - | GH170 |
| TC | HRGMv2_0555_19 | HRGMv2_0555_19_6 | 7727 | 8035 | - | 4.A.3.2.6 |
| CAZyme | HRGMv2_0555_19 | HRGMv2_0555_19_7 | 8193 | 9626 | + | GH1 |
Gene ID: HRGMv2_0555_19_3
Type: TC
Location: 4878 - 6212 (-)
Type: TC
Location: 4878 - 6212 (-)
Gene ID: HRGMv2_0555_19_4
Type: TC
Location: 6259 - 6594 (-)
Type: TC
Location: 6259 - 6594 (-)
Gene ID: HRGMv2_0555_19_5
Type: CAZyme
Location: 6615 - 7697 (-)
Type: CAZyme
Location: 6615 - 7697 (-)
Gene ID: HRGMv2_0555_19_6
Type: TC
Location: 7727 - 8035 (-)
Type: TC
Location: 7727 - 8035 (-)
Gene ID: HRGMv2_0555_19_7
Type: CAZyme
Location: 8193 - 9626 (+)
Type: CAZyme
Location: 8193 - 9626 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Brachyspirae
Order
Brachyspirales
Family
Brachyspiraceae
Genus
Brachyspira
Species
Brachyspira aalborgi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.