Genome Details
Selected Rep_genome_ID: HRGMv2_0542
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0542 | 2,757,838 | 97.79% | 0.05% | Malaysia | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0542_CGC21 | CGCFAM_00002 | Yes | 3 | 2 | |
| HRGMv2_0542_CGC6 | CGCFAM_00007 | Yes | 11 | 6 | |
| HRGMv2_0542_CGC18 | CGCFAM_00034 | Yes | 9 | 4 | |
| HRGMv2_0542_CGC26 | CGCFAM_00038 | Yes | 3 | 1 | |
| HRGMv2_0542_CGC4 | CGCFAM_00181 | Yes | 4 | 1 | |
| HRGMv2_0542_CGC10 | CGCFAM_00266 | Yes | 4 | 1 | |
| HRGMv2_0542_CGC23 | CGCFAM_01415 | Yes | 6 | 3 | |
| HRGMv2_0542_CGC33 | CGCFAM_03356 | Yes | 7 | 3 | |
| HRGMv2_0542_CGC15 | CGCFAM_04006 | Yes | 3 | 1 | |
| HRGMv2_0542_CGC19 | CGCFAM_04696 | Yes | 3 | 1 | |
| HRGMv2_0542_CGC12 | CGCFAM_05965 | Yes | 5 | 2 | |
| HRGMv2_0542_CGC5 | CGCFAM_05969 | Yes | 7 | 2 | |
| HRGMv2_0542_CGC27 | CGCFAM_06016 | Yes | 7 | 2 | |
| HRGMv2_0542_CGC30 | CGCFAM_09709 | Yes | 4 | 2 |
Top CAZyme Families