dbCAN Logo

Cluster: HRGMv2_0542_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0542_28 HRGMv2_0542_28_9 7511 9382 - GH13_46
NULL(UNKNOWN) HRGMv2_0542_28 HRGMv2_0542_28_10 9470 9559 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0542_28 HRGMv2_0542_28_11 9598 11502 - GH13_14
CAZyme HRGMv2_0542_28 HRGMv2_0542_28_12 11662 13800 - GH97
CAZyme HRGMv2_0542_28 HRGMv2_0542_28_13 13884 16646 - GH77
TC HRGMv2_0542_28 HRGMv2_0542_28_14 16756 18075 - 2.A.2.6.2
TF HRGMv2_0542_28 HRGMv2_0542_28_15 18276 19301 - LacI
TC HRGMv2_0542_28 HRGMv2_0542_28_16 19676 22699 + 1.B.14.6.1
TC HRGMv2_0542_28 HRGMv2_0542_28_17 22791 24512 + 8.A.46.1.1
Gene ID: HRGMv2_0542_28_9
Type: CAZyme
Location: 7511 - 9382 (-)
Gene ID: HRGMv2_0542_28_10
Type:
Location: 9470 - 9559 (-)
Gene ID: HRGMv2_0542_28_11
Type: CAZyme
Location: 9598 - 11502 (-)
Gene ID: HRGMv2_0542_28_12
Type: CAZyme
Location: 11662 - 13800 (-)
Gene ID: HRGMv2_0542_28_13
Type: CAZyme
Location: 13884 - 16646 (-)
Gene ID: HRGMv2_0542_28_14
Type: TC
Location: 16756 - 18075 (-)
Gene ID: HRGMv2_0542_28_15
Type: TF
Location: 18276 - 19301 (-)
Gene ID: HRGMv2_0542_28_16
Type: TC
Location: 19676 - 22699 (+)
Gene ID: HRGMv2_0542_28_17
Type: TC
Location: 22791 - 24512 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List