Genome Details
Selected Rep_genome_ID: HRGMv2_0398
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella sp900541335
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0398 | 2,539,502 | 97.45% | 0% | China | Asia | HRGM |
| MGYG000002783 | 2,416,856 | 96.13% | 0.05% | United States | North America | UHGG |
| Rep_128 | 2,463,164 | 94.8162% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0398_CGC4 | CGCFAM_00032 | Yes | 6 | 2 | |
| HRGMv2_0398_CGC17 | CGCFAM_00072 | Yes | 3 | 2 | |
| HRGMv2_0398_CGC19 | CGCFAM_00352 | Yes | 9 | 2 | |
| HRGMv2_0398_CGC12 | CGCFAM_00551 | Yes | 4 | 1 | |
| HRGMv2_0398_CGC14 | CGCFAM_00798 | Yes | 5 | 1 | |
| HRGMv2_0398_CGC13 | CGCFAM_00923 | Yes | 3 | 1 | |
| HRGMv2_0398_CGC11 | CGCFAM_02990 | Yes | 3 | 1 | |
| HRGMv2_0398_CGC9 | CGCFAM_03617 | Yes | 3 | 1 | |
| HRGMv2_0398_CGC10 | CGCFAM_05168 | Yes | 3 | 1 | |
| HRGMv2_0398_CGC8 | CGCFAM_06001 | Yes | 10 | 1 | |
| HRGMv2_0398_CGC18 | CGCFAM_07348 | Yes | 4 | 1 |
Top CAZyme Families